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herpetology

February 21, 2024 by Erin Southerland

Carnegie Museum of Natural History Researchers Describe Seven New Species of African Skinks

Trachylepis wilsoni. Photo credit: Luis Ceríaco.

Researchers from Carnegie Museum of Natural History (CMNH) and international colleagues describe seven species of skinks from the African nation of Angola that are new to science. In a study recently published in Bulletin of the American Museum of Natural History, the research team review all the occurring species of the genus Trachylepis in Angola and conclude there are seven new species.  

Two of the new species names, Trachylepis attenboroughi (“Attenborough’s Skink”) and Trachylepis wilsoni (“Wilson’s Wedge-snouted Skink”) honor iconic naturalists David Attenborough and Edward O. Wilson, respectively. The other names honor the late French herpetologist Roger Henri Bour, Angolan herpetologists Suzana A. Bandeira and Hilária Valério, the Angolan chieftain Mwene Vunongue (1800–1886), and the Ovahelelo ethnolinguistic group in gratitude for supporting and welcoming the research team and permitting them to study fauna of their lands.  

“It is an honor to name two new species after Sir Attenborough and E.O. Wilson,” said Mariana Marques, CMNH Collection Manager for the Section of Amphibians and Reptiles. “Both naturalists played a crucial role in my academic and professional paths, and their legacy definitely sparked my passion for African wildlife. We hope that naming two species in recognition of such inspirational naturalists can raise awareness worldwide that there are still new species to be discovered and described while many others are becoming extinct before they are even discovered. We are in a race against time to save our biodiversity, we cannot preserve what we do not know.” 

Trachylepis attenboroughi. Photo credit: Luis Ceríaco.

“It’s equally important to acknowledge the people of Angola,” said CMNH Research Associate and CIBIO/BIOPOLIS Researcher Luis Ceríaco. “We owe so much to them, including scientists who have contributed vital knowledge of the country’s beautiful biodiversity and the people who live on this land and who welcomed us and supported these endeavors. Both Suzana and Hilária started participating in this project as students, and now they are both leaders in their respective fields in Angola. They are training a new generation of Angolan biologists and conservationists. Honoring them with these two new species is a way to celebrate the new generation of African naturalists!”  

The description and naming of new species provides critical insights for biologists, contributes to our understanding of the evolutionary processes that shaped today’s biodiversity, and updates the catalogue of life on Earth. As biodiversity grows ever more vulnerable on a worldwide scale, a clear understanding of the real number of species and their distribution is fundamental to developing effective conservation plans.  

Angola, a country in southwestern Africa, is one of the most biodiverse countries on the continent, with high levels of endemism, or species that occur nowhere else in the world. This diversity is due to the county’s geographic position and wide diversity of biomes—including tropical rainforests, savannahs, and deserts, providing the specific habitats for species to adapt and speciate. Angolan biodiversity serves as a trove of new scientific knowledge, due in part to the armed conflicts that have engulfed the country for more than four decades, impeding research. 

In addition to Marques and Ceríaco, the research team includes Diogo Parrinha, CIBIO/BIOPOLIS PhD Candidate; Arthur Tiutenko, Friedrich-Alexander University of Erlangen/Nuremberg Assistant Professor; Jeffrey Weinel, American Museum of Natural History Postdoctoral Fellow; Brett Butler, Universidad Nacional Autónoma de Mexico PhD Candidate; and Aaron Bauer, Villanova University, Professor.  

Filed Under: Press Release Tagged With: amphibians and reptiles, herpetology, Luis Ceriaco, Mariana Marques, Science News

November 9, 2023 by Erin Southerland

Museum Researchers Describe Five New Amphibian and Reptile Species in 2023

Five frogs in the genus Amolops: A: Amolops cremnobatus, B: A. tanfuilianae sp. nov., C: A. sengae sp. nov., D: A. kottelati sp. nov., E: A. attiguus sp. nov.
Acontias mukwando. Photo credit: Arthur Tiutenko.

Researchers in Carnegie Museum of Natural History’s (CMNH) Section of Amphibians and Reptiles celebrate five new species described in 2023. Associate Curator Dr. Jennifer Sheridan and an international research team describe four new species of Southeast Asian frogs in the genus Amolops in the journal Vertebrate Zoology. Collection Manager Mariana Marques and international colleagues describe a new species of legless skink (small lizard) from Angola in the African Journal of Herpetology. Both museum researchers are lead authors of their respective studies. 
 
Marques and Sheridan’s discoveries took place 6,000 miles apart on different continents, yet both provide new scientific insights about their respective regions. In the face of a worldwide decline in biodiversity due to human impact, the documentation of new-to-science species fills vital knowledge gaps for a better understanding of ecosystem health. The better scientists can document biodiversity, the better they understand the effects of biodiversity loss and how to identify future conservation goals. 
 
“Publishing five new species within less than three weeks is exciting for us and the museum,” said Sheridan. “Both discoveries required a combination of field work and research back at the museum. Mariana knew in the field that she had likely encountered an undescribed species, while in my case, these frogs were labeled as Amolops cremnobatus in the field because that’s what they looked like. Years later, once we started looking closely at numerous individuals collected by many researchers, we began to fully realize the diversity hidden in the Amolops genus.”

Dr. Jennifer Sheridan, Associate Curator of Amphibians and Reptiles.

Sheridan and researchers from Laos and North Carolina hypothesized that the Lao torrent frog Amolops cremnobatus, first described in 1998, is actually five species in the genus Amolops based on mitochondrial DNA analysis of specimens from Laos, Vietnam, and Thailand. Their paper in Vertebrate Zoology describes the four new species Amolops tanfuilianae, Amolops kottelati, Amolops sengae, and Amolops attiguus. 

“These are extremely cryptic species,” said Sheridan. “So, determining the differences is not as simple as ‘specimen A has different coloration than cremnobatus’ or anything like that.” The visual differences between adult specimens were small and included varied finger lengths and the number of vomerine teeth (used to capture and hold prey). Tadpole morphology (size, shape, and structure) was key; even though adults are collected more often than tadpoles for scientific study, tadpole information is important. Body length, presence or absence of glands, and other physical features in tadpoles provided crucial data to differentiate the new Amolops species. Molecular data including mtDNA and nuDNA analysis also revealed differences the research team needed to describe the four new species. The team recognizes that continued research in Thailand may reveal additional species. 

Meanwhile, Marques and an international team of researchers discovered the skink Acontias mukwando on Serra da Neve, an inselberg, or isolated, rocky outcrop, in Angola, one of the most ecologically diverse countries in Africa. Moveable eyelids and distinct coloration distinguish the new species, Acontias mukwando, from other species in the genus Acontias. The research team chose the species name in honor of the local Mukwando tribe to recognize their support and friendship during field work.

Both Sheridan and Marques used specimens from the collections of multiple other museums to fully determine how these newly described species are unique, and how they relate to their closest relatives. They relied on collections made by numerous researchers from multiple countries, highlighting the value of collaborative museum networks for understanding global biodiversity.

“Finding a specimen like Acontias is always exciting,” said Marques. “These animals spend most of their time under rocks and foliage, and they are not usually seen by people. There is so much we don’t know about them. Discovering that a member of a little-known group occurs on top of an equally obscure mountain was such an exciting mystery to solve. It was one of those rare ‘wow’ moments in your career as a scientist! My goal is to provide a solid and scientific overview of the fauna occurring in Serra da Neve, in order to support its conservation and contribute to the understanding of its rare biodiversity.”

CMNH’s Section of Amphibians and Reptiles maintains a collection of more than 230,000 specimens and ranks as the ninth largest amphibian and reptile collection in the United States. It includes 156 holotypes, the single type specimens upon which the descriptions and names of their respective species are based. 

Filed Under: Press Release Tagged With: amphibians and reptiles, herpetology, Jennifer Sheridan, Mariana Marques, Science News

June 23, 2023 by Erin Southerland

From Collections User To Collections Manager

Introducing Mariana Marques, the New Collection Manager for the Section of Amphibians and Reptiles

by Mariana Marques
With a Hemidactylus greefii – São Tomé giant gecko, São Tomé island.

I’m not sure when I first entered in a natural history museum, but I know that these establishments have always been my favorite places to visit. I did my bachelor’s degree in biology in the University of Évora, a small and picturesque town in southern Portugal surrounded by one of the most biodiverse habitats of the Iberian Peninsula, the unique savanna-like ecosystem known as the “montado.” In the intervals between classes, I loved to go look for the critters that surrounded the university field station where most of my classes were held. I was lucky enough to be in one of the places with the highest diversity of amphibians and reptiles in the country, and in a natural and unspoiled area which meant that I could easily see good numbers of these animals. Being able to handle and study these animals in the field woke up my passion for herpetology, and I decided that I wanted to become a herpetologist.

I started to collaborate on projects in herpetology, and I was lucky enough to visit the outstanding collections of the Natural History Museum of Paris while I was an undergraduate. Most of the projects I was participating in had a strong taxonomic focus, and therefore specimens were the basis of my research. I had become specialized in measuring snout-vent length, counting scales, and describing the coloration of preserved lizards, frogs, and snakes from across the world. With these, I started to better understand the importance of historical labels, catalog numbers, old publications citing these specimens, and modern databases. 

My path turned to Africa during master’s thesis work as I started working with the poorly known fauna of two Portuguese-speaking countries on the continent: Angola, in southwestern Africa, and São Tomé & Príncipe, an island nation in the Gulf of Guinea. For this work, I learned another new skill: specimen collecting. As an apprentice naturalist, I learned where to find species of interest, how to collect them safely, and how to prepare and fix them to become museum specimens. These new experiences gave me an increased appreciation of our collections and their importance. As an MSc and PhD student, I described species new to science, and catalogued and mapped herp diversity to support their conservation. 

Preparing specimens field tags in the company of the young future naturalists at Príncipe island.
Photo by: Luis M.P. Ceríaco, 2015.

Although I’ve visited many collections in Europe, Africa, and the US (including CMNH!), I was mostly based in Portugal. The Portuguese collections had suffered considerable neglect which made most of them almost unusable. However, taxonomists need collections, so together with colleagues, I embarked on the mission of rescuing those collections to make them accessible and usable for researchers. Through this process I learned how a collection should be housed, and best practices for collection management and care. I became a collections manager!

Starting from scratch. Listing all herpetological material at Instituto de Investigação Científica Tropical, Lisboa, Portugal. Photo by: Luis M.P. Ceríaco, 2014.

Currently, while I still love to do research, participate in fieldwork, and describe new species, I love to be taking care of specimens in old jars, making them accessible to researchers and to the public, telling stories about them, and ensuring they are preserved for generations to come. Natural history collections, such as the one we have at Carnegie Museum of Natural History, are fundamental tools for science and conservation, and new promising technologies are showing us that their potential is far beyond my traditional snout-vent length measuring and scale counting.

Becoming the Collection Manager of the Section of Amphibians and Reptiles of Carnegie Museum of Natural History is both a challenge and an honor. And what I find more curious about it, is that in 2018, when I visited the museum and used its collections for my own research, I remember saying to myself: this is a city where I could see myself living!

At Carnegie Museum of Natural History, Section of Amphibians and Reptiles in 2018, studying the Angolan material from Pulitzer Expedition, with Aaron Bauer and Luis Ceríaco. Photo by: Luis M.P. Ceríaco, 2018.

Mariana Marques is Collection Manager of Amphibians and Reptiles at Carnegie Museum of Natural History.

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Carnegie Museum of Natural History Blog Citation Information

Blog author: Marques, Mariana
Publication date: June 23, 2023

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Filed Under: Blog Tagged With: amphibians and reptiles, herpetology, Mariana Marques, Science News

June 15, 2021 by wpengine

Getting Started: a high school intern’s experience in the herp section

by Jaylynn Smith

Curator note: We currently have an intern from a local high school working with us for ten weeks. The goal of the internship is to gain experience working on collections care and maintenance, learn about amphibian and reptile biology and taxonomy, and to create social media content related to this experience. Look for more content from our intern in the coming weeks!

The first week of my internship was completed! So far it has been a very enjoyable experience. The opportunity to be behind the scenes and learn hands-on about the different specimens that are held in the Alcohol House, and the way they are separated into their taxonomic families has been exciting.

Before my first week I had no knowledge of how these animals were classified or the way they were preserved. However, after the first few days I gained a bit more information on them, like the way they’re stored in 70% ethanol and how there are sections for each major group (frogs, snakes, turtles, etc.). This was very fun since I got more insight and learned more about the reptiles and amphibians I’d be working with. I also learned a bit about how to maintain and take care of the collection, such as testing the concentration levels in the jars and making sure it is at 70%, and also that each jar is filled all the way to the top so the specimens won’t dry out.

Figure 1. Counting and sorting a loan of ring-necked snakes (Diadophis punctatus).

Additionally, we dove into checking the status of loans, a museum service which is very similar to the way libraries loan books. A researcher may borrow specimens for comparative study or to learn more about that specific animal. Once the borrowed materials are back in our care, we have to make sure every one of them has been returned safely. This sometimes means taking the specimens out of their jars and counting them all! (Figure 1) Doing this routine work gave me the chance to be up close with the specimens and more hands-on. I found it very interesting being able to touch the animals and see how different they are from each other, like the way patterns may differ on certain snakes or even seeing frog mating behavior (Figure 2)!

Figure 2. A male wood frog (Rana sylvatica) holding onto the female during amplexus, a mating position of frogs and toads.

Not only do I have this great opportunity through this internship, I also can share much of the museum experience with my family as well with the benefits that come along with it. Over the weekend I went to the museum with my younger siblings, allowing them to learn more and broaden their knowledge of different animals from both the past and present. While we were there, we came across the Alcohol House Interactive exhibit in Discovery Basecamp, a display featuring information, images, and even actual specimens from the Alcohol House. This gave me the chance to tell my younger siblings about what I do in the Alcohol House. I was able to talk about the specimens I worked with so far and how fascinating it all has been just in the first week. Moving forward my goal is to learn even more about the animals that I’m working with and the process that goes into taking care of them. I also hope to do my own research on them and find answers to questions I may have. But at this point in time I am very optimistic and thrilled about the future of being an intern at the Carnegie Museum of Natural History.

Jaylynn Smith is an intern in the Section of Amphibians and Reptiles. Museum employees are encouraged to blog about their unique experiences and knowledge gained from working at the museum.

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A Summer Internship at Powdermill

Carnegie Museum of Natural History Blog Citation Information

Blog author: Smith, Jaylynn
Publication date: June 15, 2021

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Filed Under: Blog Tagged With: amphibians and reptiles, behind the scenes, herpetology, Jaylynn Smith, Museum Employees

April 20, 2021 by wpengine

An Illuminating Tale of Tracking Turtles

by Amanda K. Martin

*All research was conducted under approved permits from by IACUC, ODNR, and Metroparks. Do not try this at home with local wildlife. Photos by A. Martin unless noted otherwise.

Where do eastern box turtles go? When I started my graduate schooling in Dr. Karen Root’s lab at Bowling Green State University in Ohio, I was quite intrigued by this question. To address it, I conducted a study of box turtle movements in the Oak Openings Region, the distinctive landscape of oak savannas, woodlands, and wet prairies that stretches across seven counties in Northwest Ohio and Southeast Michigan.

A method called radio telemetry was vital to my work. I walked around under the forest canopy searching for individuals (female or male) and whenever I found one, typically sitting still on the ground, I would pick it up while wearing gloves. In order to track its movements, I attached a radio transmitter onto the carapace (upper shell) using a special type of glue (Fig. 1A). After about a month of searching, I was able to track box turtles at two locations in the Toledo Metroparks system, six individuals in Oak Openings Preserve, and three individuals in Secor Metroparks.

Two to three times a week, I would travel to these local parks and track each turtle using a silver three-pronged antenna and attached receiver. This portable combination detects the signal frequency produced by the transmitter on the tagged turtles, generating a “beeping” sound as it receives the electronic pulse. Guided by “beeps” I could re-find each turtle within an hour (Fig. 1B) depending on how dense the forest understory was. If I walked in the wrong direction, the noise would fade away and become quieter, but as I moved closer to the turtle’s location, the “beeping” sound would get louder and more frequent until I reached the turtle. Sometimes I would walk right past an individual sitting quietly in the leaf litter or under a log as their shell is often highly camouflaged to blend with the sunlit and shadowed patterns of a forest floor. One nice aspect of tracking box turtles with radio telemetry is that they do not run away very quickly, so they are easy to follow!

turtle on the ground among sticks and leaves
woman holding an antenna and receiver in the woods
Fig. 1A (top) and Fig. 1B (bottom): A box turtles with a transmitter (A) tracked by A. Martin using radio telemetry (antenna and receiver; B) in Oak Openings Region, Ohio, USA. Photo by S. Martin (B).

Radio telemetry is an excellent method for re-locating individuals, and provides a snapshot of where the individual is at a given time. With long-term tracking over the active season (mid-March to early November), researchers can better understand movements within a turtle’s home range, the area the animal regularly travels to meet its daily requirements, including food, shelter, and thermoregulation. Home ranges are estimated by drawing an outline around the outermost locations where a turtle was detected throughout the year, and assuming that the individual uses the area inside this boundary (Fig. 2A). Each time a turtle was found, I recorded the GPS coordinates of its location, and could then measure how far the turtle traveled by drawing a straight line between each location point. However, turtles may not always travel in a straight line, but rather follow an indirect route between detection points (Fig. 2B), so this method likely underestimates actual travel distance.

blue diagram showing box turtle home range
diagram showing box turtle distance traveled
Fig. 2A (top) and Fig. 2B (bottom): Box turtle home range (blue area) with daily movements (each color represents one day of travel) using fluorescent powder (A) and an example of an estimated distance traveled (solid black straight line) and actual distance traveled (dotted black curvier line) between location points (black circles; B).

A research technique involving fluorescent powder can produce a far more accurate picture of daily box turtle movements. Non-toxic fluorescent powder is applied to the turtle’s plastron (underside; Fig. 3A) which then leaves a distinct trail as the turtle travels throughout its environment. At night, with the use of an ultraviolet light (Fig. 3B) these trails can then be illuminated, traced, and mapped. Since box turtles tend to travel near or over the same pathways, and because individual home ranges frequently overlap, multiple powder colors are required for some tracking studies.

I used multiple colors (red, blue, yellow, orange) for different days and individuals. The results of my tracking work using this technique demonstrated that box turtles traveled 32 meters per day, with females traveling slightly less than males, and that 95% of movements were less than 6 meters.

box turtle held in a person's hand
two people at night in the forest illuminated by blue light
woman with a ruler in the forest
Fig. 3A (top), Fig. 3B (middle), and Fig. 3C (bottom): A freshly painted plastron of a male box turtle (A), A. Martin with a field assistant illuminating the fluorescent powder trail with an ultraviolet light (B, photo by A. Kappler), and A. Martin measuring leaf litter along a box turtle’s pathway (C).

Tracking animals with fluorescent powder is more laborious than radio telemetry but demonstrates fine scale movement patterns not detected by radio telemetry. The frequent use of short movements, for example, is likely related to thermoregulation requirements (the need to move in and out of cool, shady patches), or encounters with multiple obstacles ranging from small to large logs, dense shrubs, and trees. Radio telemetry provides an estimation of home range size, while fluorescent powder tracking provides details on how that home range is utilized. In tandem, these research tools can provide important information on habitat use for local land managers, who can facilitate preservation of these reptiles.

For more information on this project, including data on eastern garter snake movements, check out Chapter 4 of my dissertation.

Amanda K. Martin is a Post-doctoral Researcher in Section of Amphibians and Reptiles. Museum employees are encouraged to blog about their unique experiences and knowledge gained from working at the museum.

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Ask a Scientist: How does climate change affect turtle behavior?

Carnegie Museum of Natural History Blog Citation Information

Blog author: Martin, Amanda K.
Publication date: April 20, 2021

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Filed Under: Blog Tagged With: Amanda Martin, amphibians and reptiles, herpetology, Science News

March 31, 2021 by Erin Southerland

RESEARCHERS ANNOUNCE “RESURRECTION” OF SKINK SPECIES

Philippine species Brachymeles burksi bears unique evolutionary lineage distinguishing it from other skinks

 
Discovery intensifies need for conservation

Holotype specimen of Brachymeles burksi in the Carnegie Museum of Natural History collection. 

An international team of researchers announces the “resurrection” of the Philippine skink species Brachymeles burksi. The species, originally named in 1917 by Edward Harrison Taylor, was recategorized in 1956 as Brachymeles bonitae and has not been considered its own species since. In a paper published by the Philippine Journal of Systematic Biology, colleagues from Carnegie Museum of Natural History, Sam Noble Museum at the University of Oklahoma, University of Texas Rio Grande Valley, Philippine National Museum, and University of Kansas conclude that B. burksi represents a distinct evolutionary lineage making it a unique species.

Skinks, among the most diverse groups of lizards, are generally recognized for their small legs and, in most cases, lack of a pronounced neck.  The holotype, or single specimen upon which a new description and species name are based, of B. burksi is held in the herpetology collection at Carnegie Museum of Natural History (CMNH). 

“We are really lucky here at CMNH to have an incredible collection of 157 holotypes, many from the Philippines,” says Jennifer Sheridan, CMNH’s Curator of Amphibians and Reptiles. “My collaborators and I have worked on amphibians and reptiles of Southeast Asia for several decades, and I was excited to be invited to be part of this work. Southeast Asia has a high rate of new species description, which means that there are lots of species that haven’t yet been officially named and thus, whose conservation status cannot be assessed.”

The team confirmed that B. burksi is not only different from B. bonitae, but also confined to the islands of Marinduque and Mindoro, whereas B. bonitae is found on the much larger island of Luzon. “This means that B. burksi actually has quite a small geographic distribution,” Sheridan says, “which in turn means that populations on Marinduque and Mindoro are of even greater conservation concern than previously thought.”

Unlike B. bonitae, B. burksi has fewer presacral vertebrae, as well as fewer axilla–groin scale rows and paravertebral scale rows. Further, B. burksi represents a distinct evolutionary lineage from B. bonitae. 

When scientists examine organisms, especially from groups that have variable morphologies, they sometimes reclassify species. Sheridan says, “Think of it as having two groups of individuals, A and B. Group A was described in 1839, and in 1917, scientists found group B and named it as a new species. Then in 1956 scientists said wait, group B individuals look the same as species A, so group B gets lumped with group A. Our recent work shows that actually, A and B are different, based on a combination of genetics, morphology, and geographic distribution.”

The Philippines, an archipelago of more than 7,100 islands, is recognized globally as a megadiverse nation and a biodiversity hotspot. Understanding of the diversity of Philippines amphibians and reptiles has increased significantly in the last decade thanks in part to closer analysis of poorly understood species complexes that are erroneously thought to be one species. This study, and others like it that identify and species-level diversity, will prove critical to developing effective conservation strategies for the Philippines. 

Filed Under: Press Release Tagged With: amphibians and reptiles, herpetology, Jennifer Sheridan

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